List of citrus diseases

(Redirected from Phomopsis stem-end rot)

The following is a list of diseases in citrus plants.

Bacterial diseases edit

Bacterial diseases
Bacterial spotXanthomonas euvesicatoria pv. citrumelo
Black pit (fruit)Pseudomonas syringae
BlastPseudomonas syringae
Citrus cankerXanthomonas citri pv. citri
Citrus variegated chlorosisXylella fastidiosa
Huanglongbing = citrus greeningCandidatus Liberibacter asiaticus

Candidatus L. africanus

Fungal diseases edit

Fungal diseases
Albinism

Alternaria alternata
= Alternaria tenuis
Aspergillus flavus

Alternaria brown spotAlternaria alternata
Alternaria leaf spot of rough lemonAlternaria citri
Alternaria stem-end rotAlternaria citri
Anthracnose = wither-tip

Glomerella cingulata
Colletotrichum gloeosporioides [anamorph]

Areolate leaf spot

Thanatephorus cucumeris
= Pellicularia filamentosa
Rhizoctonia solani [anamorph]

Black mold rotAspergillus niger
Black root rot

Thielaviopsis basicola
Chalara elegans [synanamorph]

Black rotAlternaria citri
Black spot

Guignardia citricarpa
Phyllosticta citricarpa [synanamorph]

Blue moldPenicillium italicum
Botrytis blossom and twig blight, gummosis

Botrytis cinerea
Botryotinia fuckeliana [teleomorph]

Branch knotSphaeropsis tumefaciens
Brown rot (fruit)

Phytophthora citricola
Phytophthora citrophthora
Phytophthora hibernalis
Phytophthora nicotianae var. parasitica
= Phytophthora parasitica
Phytophthora palmivora
Phytophthora syringae

Charcoal root rotMacrophomina phaseolina
Citrus black spotGuignardia citricarpa
Damping-off

Pythium sp.
Pythium aphanidermatum
Pythium debaryanum
Pythium rostratum
Pythium ultimum
Pythium vexans
Rhizoctonia solani

Diplodia gummosis and stem-end rot

Lasiodiplodia theobromae
= Botryodiplodia theobromae
= Diplodia natalensis
Botryosphaeria rhodina [teleomorph]

Dothiorella gummosis and rot

Botryosphaeria ribis
Dothiorella gregaria [anamorph]

Dry root rot complex

Nectria haematococca
Fusarium solani [anamorph]
together with other wound-invading agents

Dry rot (fruit)

Ashbya gossypii
Nematospora coryli

Fly speck

Schizothyrium pomi
Zygophiala jamaicensis [anamorph]

Fusarium rot (fruit)Fusarium spp.
Fusarium wilt

Fusarium oxysporum f.sp. citri

Gray mold (fruit)Botrytis cinerea
Greasy spot and greasy spot rind blotch

Mycosphaerella citri
Stenella citri-grisea [anamorph]

Green moldPenicillium digitatum
Heart rot

Ganoderma applanatum
Ganoderma brownii
Ganoderma lucidum
and other basidiomycetes

Hendersonula branch wiltHendersonula toruloidea
Leaf spot

Mycosphaerella horii
Mycosphaerella lageniformis

Mal secco

Phoma tracheiphila
= Deuterophoma tracheiphila

Mancha foliar de los citricosAlternaria limicola
MelanoseDiaporthe citri

Phomopsis citri [anamorph]

Mucor fruit rot

Mucor paronychia
Mucor racemosus

Mushroom root rot = shoestring root rot or oak root fungus

Armillaria mellea
= Clitocybe tabescens
Rhizomorpha subcorticalis [anamorph]

Phaeoramularia leaf and fruit spotPhaeoramularia angolensis
Phymatotrichum root rotPhymatotrichopsis omnivora
Phomopsis stem-end rot

Phomopsis citri
Diaporthe citri [teleomorph]

Phytophthora foot rot, gummosis and root rot

Phytophthora citrophthora
Phytophthora hibernalis
Phytophthora nicotianae var. parasitica
= Phytophthora parasitica
Phytophthora palmivora
Phytophthora syringae

Pink disease

Erythricium salmonicolor
= Corticium salmonicolor
Necator decretus [anamorph]

Pink moldGliocladium roseum
Pleospora rot

Pleospora herbarum
Stemphylium herbarum [anamorph]

Poria root rot

Oxyporus latemarginatus
= Poria latemarginata

Post bloom fruit dropColletotrichum acutatum
Powdery mildew

Oidium tingitaninum
= Acrosporium tingitaninum

Rhizopus rotRhizopus stolonifer
Rio Grande gummosis

Possibly Lasiodiplodia theobromae
Hendersonula toruloidea
and other unknown agents

Rootlet rot

Pythium rostratum
Pythium ultimum

Rosellinia root rotRosellinia sp.
Scab

Elsinoë fawcettii
Sphaceloma fawcettii [anamorph]

Sclerotinia twig blight, fruit rot and root rotSclerotinia sclerotiorum
Septoria spotSeptoria citri
Sooty blotchGloeodes pomigena
Sour rot

Geotrichum citri-aurantii
Galactomyces citri-aurantii [teleomorph]
Galactomyces candidum
Galactomyces geotrichum [teleomorph]

Sweet orange scabElsinoë australis
Thread blight

Corticium stevensii
Pellicularia koleroga

Trichoderma rot

Trichoderma viride
Hypocrea sp. [teleomorph]

Twig blightRhytidhysteron rufulum
Ustulina root rot

Ustulina deusta
Nodulisporium sp. [anamorph]

Whisker mold

Penicillium ulaiense

White root rot

Rosellinia sp.
Rosellinia necatrix
Dematophora necatrix [anamorph]
Rosellinia subiculata

Nematodes, parasitic edit

Nematodes, parasitic
Citrus slump nematode

Pratylenchus coffeae

Dagger nematode

Xiphinema spp.

Lesion nematode

Pratylenchus spp.
Pratylenchus brachyurus
Pratylenchus coffeae
Pratylenchus vulnus

Needle nematode

Longidorus spp.

Root-knot nematode

Meloidogyne spp.

Sheath nematode

Hemicycliophora spp.
Hemicycliophora arenaria

Slow decline (citrus nematode)

Tylenchulus semipenetrans

Spreading decline (burrowing nematode)

Radopholus similis

Sting nematode

Belonolaimus longicaudatus

Stubby-root nematode

Paratrichodorus spp.

Stunt nematode

Tylenchorhynchus spp.

Viral diseases edit

Viral diseases
Citrus mosaicSatsuma dwarf-related virus
Bud union creaseVirus for some combinations, otherwise genetic or unknown
Citrus leaf rugosegenus Ilarvirus, Citrus leaf rugose virus (CLRV)
Citrus yellow mosaicgenus Badnavirus
Crinkly leafCrinkly leaf virus (strain of Citrus variegation virus)
Infectious variegationgenus Ilarvirus, Citrus variegation virus (CVV)
Navel infectious mottlingSatsuma dwarf-related virus
PsorosisCitrus psorosis virus (CPsV)
Satsuma dwarfSatsuma dwarf virus (SDV)
Tatter leaf = citrange stuntgenus Capillovirus, Citrus tatter leaf virus (probably a closely related strain of Apple stem grooving virus rather than a distinct virus
Tristeza = decline and stem pitting, seedling yellowsgenus Closterovirus, Citrus tristeza virus (CTV)
Citrus Leprosis Virus type I & II

Viroids and graft-transmissible pathogens [GTP] edit

Viroids and graft-transmissible pathogens [GTP]
Algerian navel orange virusGTP
Blight = young tree decline, rough lemon declineGTP
Blind pocketGTP
CachexiaCitrus cachexia viroid (Hostuviroid)
Chlorotic dwarfWhite-fly transmitted GTP
Citrus dwarfingVarious viroids
Citrus vein enation (CVEV) = woody gallGTP (possible luteovirus)
Citrus yellow mottleGTP
Citrus yellow ringspotGTP
Concave gumGTP
CristacortisGTP
ExocortisCitrus exocortis viroid (CEVd) Pospiviroidae
Fatal yellowsGTP
Gummy barkGTP, possible viroid
Gum pocket and gummy pittingsGTP, possible viroid
ImpietraturaGTP
Indian citrus ringspotGTP
Leaf curlGTP
Leathery leafGTP
LeprosisGTP associated with Brevipalpus spp. mites
MeaslesGTP
Milam stem-pittingGTP
Multiple sprouting diseaseGTP
Nagami kumquat diseaseGTP
Ringspot diseasesVarious GTPs
Xyloporosis = cachexiaCitrus cachexia viroid (Hostuviroid)
Yellow veinGTP
Yellow vein clearing of lemonGTP

Phytoplasmal and spiroplasmal diseases edit

Phytoplasmal and spiroplasmal diseases
Australian citrus diebackUnknown procaryote?
StubbornSpiroplasma citri (spread by leafhoppers)
Witches’ broom of limePhytoplasma

Miscellaneous diseases and disorders edit

Miscellaneous diseases and disorders
Algal disease (algal spot)Cephaleuros virescens
AmachamientoUnknown
Blossom-end clearingPhysiological
Chilling injuryCold temperatures
Citrus blightUnknown - pathogen suspected
CreasingNutritional (?)
Crinkle scurfGenetic
GranulationPhysiological
Lemon sieve-tube necrosisUnknown, but hereditary
Lime blotch = wood pocketInherited chimeral agent
Membranous stainCold temperatures
Mesophyll collapseUnknown
OleocellosisPhysiological
Postharvest pittingPhysiological
PuffingPhysiological
Rind breakdownPhysiological
Rind stainingPhysiological
Rind stipple of grapefruitEnvironmental
Rumple of lemon fruitUnknown
Shell bark complexUnknown - (viroid?)
Sooty mold (superficial, not pathogenic)Capnodium

C. citricola
Capnodium sp.

Stem-end rind breakdownPhysiological
Stylar-end breakdown of Tahiti limePhysiological
Stylar-end rind breakdownPhysiological
Stylar-end rotPhysiological
SunburnExcessive heat and light
Tangerine diebackUnknown
Water spotPhysiological
Woody galls on stemsBruchophagus fellis (Citrus Gall Wasp)
Zebra skinPhysiological

References edit